4.0 Benthic Community Patterns in the Lower
Cape Fear River System

Martin Posey and Troy Alphin

 

4.1 Summary

    For the 1999-2000 Cape Fear River report, we emphasize analysis of site characteristics, annual and seasonal variations in community structure, variations in species richness and diversity, and effects of multiple hurricanes on the Cape Fear River benthic community. These analyses are preliminary in nature, based upon only 4 years of data (3 of which were affected by hurricanes) and only 4 sampling sites. Additional sites will be required to adequately address spatial patterns. However, the 4 sites sampled provide insights into biotic community structure in the lower Cape Fear River system. Basic findings for this report are:

The Northeast Cape Fear River and Cape Fear River oligohaline sites (NCF6 and NAV) are similar in terms of numbers of species present, with low to moderate relative species richness at both sites. However, they differ in several important aspects. The NCF6 site is characterized by higher diversity, low faunal densities, and seasonal variability in abundances. In contrast, the NAV site is characterized by lower diversity, higher total faunal density, and a tendency towards winter or spring peaks in faunal abundance and seasonal replacement of dominant species. Such differences indicate fundamentally different processes controlling these communities.

Lower estuarine sites (M54 and M31) are characterized by moderate species richness and faunal abundances. They are dominated by taxa typical of other river-dominated mid Atlantic and southeastern estuaries, though clams continue to be much less common than reported in many other studies.

Although abundances fluctuated among years at all sites, overall diversity, number of species and the identity of dominant taxa remained relatively persistent over the 4 years, with some variations related to seasonality. The only exception was a gradual trend towards lower species richness over time at M31.

Hurricane effects varied among sites. However, there were few unequivocal long-term effects of multiple hurricanes on faunal abundance (though, as noted above, there were some potential effects on species richness).

 

4.2 Background

    Benthic organisms (benthos) are those organisms living in or on the bottom. In estuarine systems, the benthic community is dominated primarily by species that burrow into the sediments (infauna), often living within tubes or burrow systems. Depending on salinity, taxa dominating the infauna in most estuaries include small worms (polychaetes and oligochaetes), amphipod crustaceans, clams, and insect larvae. Benthic animals generally consume detrital, microalgal or planktonic food sources (with some predatory species present) and are prey for larger fish, shrimp and crabs. In many estuarine systems there is a strong link between timing of predator recruitment (e.g. larval fish) and their benthic prey.
    Benthic fauna are considered important indicators of water quality and are used in a variety of monitoring programs to assess overall estuarine health and to follow long-term trends in estuarine communities, especially related to anthropogenic impacts (Boesch et al. 1976, Aschan and Skullerod 1990, Simboura et al. 1995, Hyland et al. 1996). From a monitoring perspective, benthos offer three positive features: 1) they are relatively sedentary and long-lived, 2) they occupy an important intermediate trophic position, and 3) they respond differentially to varying environmental conditions. After settlement, most benthos remain within a relatively constrained area, often less than 5 m2 (depending on the taxa), for their entire adult lives. Therefore, unlike many other biotic or chemical measures, benthos reflect conditions at a specific location. Although a few opportunistic species may live for only a few weeks, most benthic animals have lifespans ranging from months to over a year, leading to a community structure that reflects average physical conditions over a time period of months. However, benthos vary greatly in their responses to changes in water quality. Some taxa are relatively tolerant of organic enrichment and low dissolved oxygen while others are quickly eliminated under low DO conditions (Boesch et al. 1976, Simboura et al. 1995). Increased nutrient inputs can strongly affect densities of some species, through indirect and direct influences on food availability and sediment conditions, while not affecting others. Similarly, there is a wide variation in tolerance to pesticides and metal contaminants such as mercury and cadmium. In general, sediment type (clays, silts, sands, etc.), organic content, deposition of sediments (such as from upstream erosion), dissolved oxygen, salinity and temperature are considered most important in determining abundances and types of animals in bottom communities. By examining shifts in the benthic community over time (years), one can gain an understanding of the major environmental processes affecting the local biota (Hyland et al. 1996).
    A variety of indices have been developed to quantify the health of estuarine systems based on the relative proportions of species tolerant or susceptible to specific water quality parameters (e.g.; EPA Benthic Index; Index of Biotic Integrity; Ampelisca toxicity tests; suspension feeder : deposit feeder ratios; deep burrower : shallow burrower ratios; the Chandler Score, and the BMWP Score Index, indices based on diversity or number of species) (Whitehurst and Lindsey 1990). However, application of most indices requires long-term monitoring sufficient in duration to separate seasonal or annual variations from variations due to changes in water quality. Benthic community studies are a major component of the national EPA Environmental Monitoring and Assessment Program for estuaries as well as regional monitoring efforts, such as in Chesapeake Bay, Florida Bay, Long Island Sound, Pamlico Sound, and Tampa Bay.
    In Spring 1996, the Benthic Ecology Laboratory of the UNCW Center for Marine Science Research began long-term studies of benthic infauna in the lower Cape Fear River, supported partially from the basic monitoring program of the Lower Cape Fear River Program and partially through the Center for Marine Science and contributions from the Benthic Ecology Laboratory. Preliminary samples were also taken during winter 1996 as part of other research efforts. The benthic monitoring component has four major long-term objectives: 1) characterize the benthic communities in the lower Cape Fear River and compare them with that of other river-dominated estuaries to gain a first-order assessment of estuarine health, 2) determine seasonal, annual and spatial patterns of variability, 3) establish correlations between benthic abundances and physical measures, and 4) establish a baseline for detecting changes in the estuarine community through examination of changes in abundances of specific indicator taxa and eventual application of standard benthic indices.
    In the 1998 and 1999 Cape Fear River reports, we established that there are strong differences among sites, as expected with salinity differences and estuarine gradients. We also presented evidence of correlations among faunal abundances and certain physical factors. Site differences may reflect differential response to and recovery from hurricane disturbance in 1996 and 1998. This report (1999-2000) focuses on variations in overall diversity, number of species, total faunal density and changes in relative abundance of major taxa groups at each site. With 4 years of data, we hope to begin the process of evaluating significant trends in benthic community health and structure and to provide a baseline for detecting future changes. With the addition of further monitoring data, we will develop some testable, predictive ability for estimating community responses to selected physical perturbations as well as examine functional guild and species-specific patterns.

 

4.3. Methodology

    Four stations are sampled as part of basic monitoring for benthic infauna: NCF6 in the Northeast Cape Fear River, NAV in the mainstem Cape Fear River, and M54 and M31 in the lower estuary (see Mallin et al. 1999). These stations span the oligohaline to mesohaline/polyhaline zones of the estuary and correspond to stations sampled as part of water quality monitoring. The basic monitoring of benthos for the Lower Cape Fear River Program involves quarterly sampling at each station. Samples are collected in winter (January-February), spring (mid March-May), summer (July-early September), and fall (October-November). Following Hurricanes Bertha and Fran in late summer 1996, Hurricane Bonnie in August 1998, and Hurricane Floyd in September 1999, additional samples were also taken to observe recovery patterns (September 1996, December 1996, February 1997, September 1998, October/November 1998, January 1999, September 1999, November 1999 and January 2000). This additional sampling was supported by the Benthic Ecology Laboratory. Post-hurricane samples collected on 1 October 1996 were only taken from stations M54 and M31 because of debris at the other 2 stations. Sorting, identification and QA/QC (LCFRP QA/QC Manual, 1998) is ongoing for some sampling dates.
    At each sampling station, benthic infaunal samples are taken with a Petite Ponar grab, 15cm x 15cm opening (0.023m2) and 15cm depth. Five grab samples are taken at each sampling location on each sampling date. Grabs are retained only if the grab was full in order to standardize volume sampled. Grab samples are taken from a boat at stations specified by GPS coordinates and all sampling locations are in approximately 6-8 feet of water (studies in other estuaries have indicated greater abundances in shallow areas as compared to deep channels within an estuary). Immediately after collection, the samples are sieved through a 0.5 mm mesh screen, preserved in 10% buffered formalin with rose bengal dye added, and transferred to 70% ethanol after 3 days for later sorting and identification. Separation of animals from remaining sediment is done under a dissecting microscope. All animals are identified to the lowest reliable taxonomic level, with random specimens verified by outside taxonomists. These procedures follow standard formats for benthic sampling outlined by the EPA Environmental Monitoring and Assessment Program and used in other monitoring programs (Hyland et al. 1996, Posey et al. 1997).
    In this chapter, we report patterns of species richness, diversity, total faunal abundance, and density patterns for major taxa groups. Species richness refers to the number of species present at a site while diversity refers to both number of species and their relative abundance. With diversity, a community dominated proportionately by one species is considered less diverse than a community with a similar number of species that are all relatively similar in abundance. Disturbance is often thought to reduce species richness by eliminating taxa not capable of withstanding the disturbance or of recovering quickly. Diversity also declines with environmental impact through a combination of effects on species richness and a tendency for impacted areas to become dominated by a few taxa (i.e. a community having very unequal abundances among species present). EPA-EMAP guidelines currently suggest diversity ranges indicating severe, moderate or low impact on a community. For this study, we calculated diversity based on the Shannon-Weiner Diversity Index (Brower et al. 1999). Both species richness and diversity can be affected by sample size. Because there were less than 5 grabs taken at some sites on some dates, we based all richness and diversity measures on the first 3 samples taken at a site on a date and did not include these measures if there were fewer than 3 reliable samples (as was the case for a few post-storm periods when debris inhibited sampling). Higher taxonomic categories were used only when they clearly did not overlap with species-level identifications (e.g. oligochaetes).

 

4.4 Results and Discussion

    A total of 222 taxa have been collected since Winter 1996. The dominant taxa are described in the 1998-1999 Lower Cape Fear River report (Mallin et al. 1999) and will be dealt with in more detail in future reports. In general, less than half of the species were collected at any single site and most species were relatively rare (Mallin et al. 1999). Below we describe general patterns of diversity and density for the 4 sites sampled.

Site descriptions
   Physical conditions at all 4 sites were described in Mallin et al. (1999; benthic and epibenthic sections) and additional water quality data is provided in the present report. General site characteristics are summarized here.
    NCF6 is located in the Northeast Cape Fear River. This site is characterized by low salinity and fine sediments. Salinity for the months in which benthos were sampled averaged 1.8 o/oo, with lower salinity during winter months (0.67 o/oo) and higher during summer (5.47 o/oo). Water temperature ranged from 5.9 oC to 28.3 oC. Dissolved oxygen varied seasonally, with a winter average of 8.8 and a summer average 3.7. DO exhibited severe declines immediately after the passage of Hurricanes Fran and Bonnie (Mallin et al. 1997, 1999, current report). Sediments are fine sands to sandy silts, with macrodetritus present on some sampling dates.
    NAV is located in the mainstem Cape Fear River. Like NCF6, this site is characterized by low salinity and fine sediments. Salinity for the months in which benthos was sampled averaged 1.2 o/oo, with lower salinity during winter months (0.25 o/oo) and higher during summer (4.03 o/oo). Water temperature ranged from 4.2 oC to 28.3 oC. Dissolved oxygen varied seasonally, with a winter average of 9.2 and a summer average 3.9. DO exhibited declines immediately after the passage of Hurricanes Fran and Bonnie (Mallin et al. 1997, 1999, current report).
    M54 is located in the mainstem Cape Fear River below the confluence of the Cape Fear and Northeast Cape Fear rivers. It is characterized by higher but more variable salinities than the NCF6 and NAV sites. Salinity for the months in which benthos was sampled averaged 5.2 o/oo but ranged from 0 to 18 o/oo. Salinity was lower during winter months (3.4 o/oo) and higher during summer (11.9 o/oo). Water temperature ranged from 8.4 oC to 28.2 oC. Dissolved oxygen varied seasonally, with a winter average of 8.9 and a summer average of 4.8 for the months sampled. DO exhibited severe declines immediately after the passage of Hurricanes Fran and Bonnie (Mallin et al. 1997, current report). Sediments are fine sands with a layer of flocculent detritus sometimes present over the surface.
    M31 is located in the Cape Fear estuary and is the furthest downstream site sampled as part of the basic monitoring program. It is characterized by higher salinities than any of the other sites. Salinity for the months in which benthos was sampled averaged 10.8 o/oo, ranging from 0.1 (immediately after Hurricane Bonnie) to 26.1 o/oo. As with the other stations, salinity was lower during winter months (8.9 o/oo) and higher during summer (18.5 o/oo). Water temperature ranged from 6.8 oC to 28.6 oC. Dissolved oxygen varied seasonally, with a winter average of 9.3 and a summer average 5.0. DO exhibited a decline immediately after the passage of Hurricane Bonnie (Chapter 2), but less so after Hurricane Fran (Mallin et al. 1997). Sediments are predominantly fine sands.

Species Richness and Diversity
   At NCF6, NAV, and M54, both diversity and species richness have remained relatively constant over the 4 years of sampling (Figures 4.1, 4.2, 4.3). Diversity and species richness values in fall 1999 were similar at all three of these sites compared to those measured at the same sites in winter 1996. However, as reported in the 1998-1999 LCFRP report (Mallin et al. 1999), the identity of species present varied considerably between seasons and years (see Table 7.4). There was some tendency for diversity and species richness to drop after hurricanes, but this tendency was not strong and varied with sites and among hurricane events. The relative constancy of these broad community measures at the 3 sites probably reflects their dominance by relatively opportunistic species that can tolerate disturbances, including variations in salinity from freshwater to upper oligohaline, as well as variations in temperature and river flow. In contrast to the other 3 sites, there was a general decline in species richness at M31 over the 4 years of monitoring (F=2.86; p<0.07; Fig. 4.4; Fig. 7.3). This site is dominated by polychaetes that may be more severely affected by occasional freshets associated with storms as well as sediment inputs compared to the fauna dominating other sites. We believe the decline in species richness at this site reflects a long-term change in the community characteristics. It may be indicative of cumulative effects of hurricanes in the lower estuary, interactions between hurricanes and anthropogenic factors (e.g. development, channelization activity, or agricultural activities), or may reflect other long-term changes in the estuary.
    Comparing richness and diversity among sites, NAV demonstrated lower diversity than the other oligohaline site sampled, NCF6. The 2 sites did not differ greatly in species richness, but the NAV site was dominated by a few common taxa, leading to lower overall diversity. Diversity and richness at the 2 lower estuarine sites were comparable to the NCF6 station and are similar or slightly less that that reported in other river-dominated systems for similar salinity and substrate characteristics.

Patterns of Abundance
   The NAV site had much higher overall faunal abundances than the NCF6 location. Peak total faunal density at NAV reached almost 275 individuals per grab, with 6 dates of near or greater than 100 individuals per grab (Figure 4.1). Total faunal abundances at NCF6 never exceeded 100 individuals per grab (Figure 4.2) and were generally less than 20 individuals per grab. The NAV site was dominated by oligochaetes, with occasional peaks in polychaete densities (primarily Maranzellaria) (Figure 4.5). Insect larvae were occasionally common, especially the midges Polypedilum, Procladius, and Tanypodinae (Table 7.4). The NCF6 site was not clearly dominated by any single taxa, with the exception of a peak in density of the polychaete Polydora in summer 1999 (Figure 4.6; Table 7.4). Maranzellaria was a common polychaete during spring 1997 and winter 1998. During other sampling periods, dominant fauna included oligochaetes, insect larvae (especially Polypedilum, Procladius, and Chaoborus) and the amphipods Gammarus palustris and Gammarus tigrinus.
    Seasonal patterns in abundance were apparent at NCF6, with greater faunal densities occurring in spring or winter for polychaetes, oligochaetes and amphipods (an exception being the single peak for Polydora in summer 1999) (Figure 4.6; Table 7.4). Insect patterns were more variable and may reflect annual weather conditions. Seasonal patterns in total faunal densities were more difficult to discern at the NAV site (Figure 4.5), reflecting differing timing of peaks in abundance for selected taxa among different years rather than the lack of any temporal variations. Peaks in total faunal abundance variously occurred in winter (1996, 1998) summer (1997) and fall (1999), often reflecting single peaks in abundance of specific taxa. Winter 1997, summer 1997, and fall 1999 peaks were due to increases in density of oligochaetes. Winter 1998 was a dramatic recruitment event of the polychaete Maranzellaria and small increases in density of insect larvae were apparent throughout fall-winter 1997. One clear pattern is high variability between years, emphasizing the need for long-term data sets in determining benthic community trends and cautioning against using data from only 2 or 3 years.
    M54 was dominated by a variety of taxa, including polychaetes (Maranzellaria, Mediomastus and Streblospio), oligochaetes and amphipods (Gammarus, Lembos, Monoculodes Table 7.4). As with NAV, seasonal patterns in total faunal density (Figure 4.3) are obscured by differing periods of peak abundance for different taxa. Polychaetes generally exhibited highest abundance in winter and spring, driven especially by Mediomastus spp. and Streblospio, with spring recruitment peaks of Maranzellaria in 1996, 1998 and 1999. Most of the taxa dominating at M54 are relatively opportunistic species characteristic of oligohaline to mesohaline areas and capable of rapid recovery from disturbances.
    The most saline estuarine station sampled as part of the basic monitoring program, M31, is almost completely dominated by polychaetes. This is typical of the mesohaline to polyhaline regions of many estuaries and reflects the greater diversity of polychaete worms in more saline waters as well as the loss of oligochaetes and insect larvae in marine areas. Among the dominant polychaetes at this site are Mediomastus spp. (M. californiensis and M. ambiseta), Streblospio benedicti, Nereis falsa, Laeonereis culveri, and Polydora socialis. Highest densities generally occurred in winter or spring, but there was interannual variability in patterns with low densities in spring 1999 and relatively higher numbers in summer 1998. This site may also experience higher salinity intrusions from Snow’s Cut.

Hurricane Effects
   Any discussion of benthic community dynamics over the past 4 years must consider the potential effects of hurricanes on benthic community structure. Hurricanes Bertha and Fran hit the Cape Fear estuary in 1996, Hurricane Bonnie in 1998 and Hurricane Floyd in 1999. There were few consistent relationships between hurricanes and diversity or species richness, though these measures did decline after some hurricane events at some sites. Total faunal density declined at all sites after either Hurricane Bertha or Hurricane Fran in 1996, though this decline did coincide with a normal summer decline in faunal densities. Total densities declined at NCF6 and M31 after Hurricane Bonnie. However, there was no decline after Hurricane Bonnie for the other 2 sites reflecting already low total densities from the summer seasonal low. Responses to Hurricane Floyd were similar in that declines were observed at M54 and NCF6, but there was little change for NAV and a spike in abundances at M31. There was little evidence for long-term trends in abundance, such as would indicate long-term effects of multiple hurricanes, that could be determined with certainty against background interannual fluctuations.

 

4.5. Conclusions and Monitoring Recommendations

    Our basic conclusions about the types of taxa dominating the Cape Fear estuary remain unchanged from the 1999 LCFRP report – this system is dominated by a moderate to low diversity of opportunistic species that are typical of mid-Atlantic, river-dominated estuaries (Mahooney and Livingston 1982; van Dolah et al 1984; Holland et al. 1987; Shaffner et al. 1987; Posey et al. 1993; Posey et al. 1996). One taxonomic group that continues to be significantly underrepresented is bivalves (clams, oysters and mussels). Diversity and species richness have fluctuated around relatively stable levels for the past several years, though total densities and the identity of dominant taxa have changed significantly from year to year and with seasons. The Northeast Cape Fear River and Cape Fear River stations continue to exhibit differences in structure, especially with respect to diversity and density patterns, patterns of seasonality, and responses to disturbance. Community responses to hurricanes appear generally short-lived at most sites, possibly reflecting the opportunistic nature and quick recovery potential for most of the dominant taxa observed. The only long-term trend noted was a gradual decline in species richness at the most saline estuarine station, M31.
    As recommended to the LCFRP Technical Advisory Committee, our primary monitoring recommendation is to include two additional sites in the Northeast Cape Fear River, two additional sites in the upper mainstem Cape Fear River (above NAV) and one additional site in the lower estuary. Our data suggests that these regions may exhibit different responses to disturbances, and possibly to pollutants or other anthropogenic impacts. However, firm conclusions cannot be made without replicate sites to control for site-specific differences.

 

4.6  Literature Cited

Aschan, M.M. and A.M. Skullerud. 1990. Effects of changes in sewage pollution on soft-bottom macrofauna communities in the inner Oslofjord, Norway. Sarsia 75:169-190.

Boesch, D.F., R.J. Diaz and R.W. Virnstein. 1976. Effects of tropical storm Agnes on soft-bottom macrobenthic communities of the James and York River estuaries and the lower Chesapeake Bay. Ches. Sci. 17:246-259.

Brower, J.E., J.H. Zar and C.N. von Ende. 1998. Field and Laboratory Methods for General Ecology. 4th Edition. McGraw Hill, Boston.

Fauchauld, K. and P.A. Jumars. 1979. The diet of worms: a study of polychaete feeding guilds. Oceanogr. Mar. Biol. Ann. Rev. 17:193-284.

Holland, A.F., A.T. Shaughnessy and M.H. Hiegel. 1987. Long-term variation in mesohaline Chesapeake Bay macrobenthos: spatial and temporal patterns. Estuaries 10:227-245.

Hyland, J.L., T.J. Herlinger, T.R. Snouts, A.H. Ringwood, R.F. Van Dolah, C.T. Hackney,G.A. Nelson, J.S. Rosen and S.A. Kokkinakis. 1996. Environmental quality of estuaries of the Carolinian Province: 1994. Annual statistical summary for the 1994 EMAP - Estuaries Demonstration Project in the Carolinian Province. NOAA Technical Memorandum NOS ORCA 97. NOAA/NOS, Office of Ocean Resources Conservation and Assessment, Silver Spring, MD. 102p.

Mahooney, B.M.S. and R.J. Livingston. 1982. Seasonal fluctuations of benthic macrofauna in the Apalachicola Estuary, Florida, USA: The role of predation. Marine Biology 69:207-213.

Mallin, M.A., M.H. Posey, M.L. Moser, G.C. Shank, M.R. McIver, T.D. Alphin, S.H. Ensign and J.F. Merritt. 1997. Environmental assessment of the lower Cape Fear River system, 1996-1997. CMSR Report No. 97-01.

Mallin, M.A., M.H. Posey, M.L. Moser, L.A. Leonard, T.D. Alphin, S.H. Ensign, M.R. McIver, G.C. Shank and J.F. Merritt. 1999. Environmental assessment of the lower Cape Fear River system, 1998-1999. CMSR Report No. 99-01.

Posey, M.H., T.D. Alphin and C.M. Powell. 1997. Plant and infaunal communities associated with a created marsh. Estuaries 20:42-47.

Posey, M.H., W. Lindberg, T. Alphin and F. Vose. 1996. Influence of storm disturbance on an offshore benthic community. Bulletin of Marine Science 59:523-529.

Posey, M.H., C.W Wigand and J.C. Stevenson. 1993. Effects of an introduced aquatic plant, Hydrilla verticillata, on benthic communities in the upper Chesapeake Bay. Estuarine, Coastal and Shelf Science 37: 539-555.

Shaffner, L.C., R.J. Diaz, C. R. Olsen and I.L. Larsen. 1987. Faunal characteristics and sediment accumulation processes in the James River Estuary, Virginia. Estuarine, Coastal and Shelf Science 25: 211-226.

Simboura, N., A. Zenetus, P. Panayotides and A. Makra. 1995. Changes in benthic community structure along an environmental pollution gradient. Mar. Poll. Bull. 30:470-474.

van Dolah, R.F., D.R. Calder and D.M. Knott. 1984. Effects of dredging and open water disposal on benthic macroinvertebrates in a South Carolina estuary. Estuaries 7:28-37.

Whitehurst, I. T. and B.I. Lindsey. 1990. The impact of organic enrichment on the benthic macroinvertebrate communities of a lowland river. Wat. Res. 24:625-630.

 

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